Run the “make” command from the shell.

(For system specific MPICH and C compilers modify the MakeFile appropriately.) After successful build, copy the executables into the folder:

cp PreprocessPaCE.pl PaCE-pipeline/PaCE-clustering cp PaCE PaCE-pipeline/PaCE-clustering

Checklist for a successful build:

  • Executables created: PaCE
  • No fatal errors or “serious” warnings flagged by the compiler (minor wa$
  • The mk uses O3 optimization level. If this high level is not supported by the C compiler being used, change it to a lower level like O2 or O1 or O0 as appropriate.