[INFO] [jar:jar {execution: default-jar}] [INFO] Preparing exec:java [WARNING] Removing: java from forked lifecycle, to prevent recursive invocation. [INFO] No goals needed for project - skipping [INFO] [exec:java {execution: default}] 11:05:36,441 DEBUG JobClient2:134 - 2011-01-26 11:05:36 JavaDaemonTest started 11:05:36,443 DEBUG JobClient2:134 - 2011-01-26 11:05:36 2011-01-26 11:05:36 This is output to StdErr… 11:05:36,906 DEBUG PropertyUtil:33 - L1 11:05:36,914 DEBUG PropertyUtil:35 - L2 11:05:36,914 DEBUG PropertyUtil:39 - L3 11:05:45,709 DEBUG JobManager:742 - Job Submission Thread is running… 11:05:45,807 DEBUG Programs:32 - Getting the list of jobs waiting to be submitted 11:06:21,839 DEBUG JobManager:289 - Submitting 8 jobs 11:06:21,843 DEBUG SwarmUtil:156 - Requesting ticket now 11:06:21,870 DEBUG SwarmUtil:162 - org.apache.axis2.rpc.client.RPCServiceClient@1 11:06:28,330 DEBUG SwarmUtil:166 - Ticket request result: Username: qdong Email: Default email address Project: GSA Project Organization: default organization Group Job Title: default job title Group Job Descriptiondefault job description Expected Number of Jobs130000 Timestamp: Wed Jan 26 11:06:27 CST 2011 TicketID-743724069 Current number of jobs submitted0 11:06:28,357 DEBUG JobManager:258 - ticketID : -743724069 11:06:28,742 DEBUG JobManager:204 - 1017 RepeatMasker [INFO] ———————————————————————— [ERROR] BUILD ERROR [INFO] ———————————————————————— [INFO] An exception occured while executing the Java class. org/biojava/bio/BioException

org.biojava.bio.BioException [INFO] ———————————————————————— [INFO] For more information, run Maven with the -e switch [INFO] ———————————————————————— [INFO] Total time: 2 minutes 22 seconds [INFO] Finished at: Wed Jan 26 11:06:28 CST 2011 [INFO] Final Memory: 17M/42M [INFO] ———————————————————————— 11:06:30,704 DEBUG JobClient2:134 - 2011-01-26 11:06:30 ShutdownHook started 11:06:31,204 DEBUG JobClient2:134 - 2011-01-26 11:06:31 shutdown 11:06:31,706 DEBUG JobClient2:134 - 2011-01-26 11:06:31 shutdown 11:06:32,207 DEBUG JobClient2:134 - 2011-01-26 11:06:32 shutdown 11:06:32,707 DEBUG JobClient2:134 - 2011-01-26 11:06:32 ShutdownHook completed